Transcript: lnc-ANKRD30B-13:2

Basic information

LNCipedia transcript ID: lnc-ANKRD30B-13:2 
LNCipedia gene ID: lnc-ANKRD30B-13
Location (hg38): chr18:14225567-14234797
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 870 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT058498
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 85.39 coding 
CPAT coding probability 94.71% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANKRD30B-13:2 no no no no

Available literature

  1. Shen (2014), Long non-coding RNA profiling in laryngeal squamous cell carcinoma and its clinical significance: potential biomarkers for LSCC., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MC5R-1:10
4.0 lnc-MC5R-12:1
4.1 lnc-MC5R-12:1
5.0 lnc-MC5R-12:1
5.1 lnc-RIOK3-102:2
5.2 lnc-ANKRD30B-13:2