Transcript: lnc-ANKRD30B-2:4

Basic information

LNCipedia transcript ID: lnc-ANKRD30B-2:4 
LNCipedia gene ID: lnc-ANKRD30B-2
Location (hg38): chr18:14894732-14905689
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1457 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1535_chr18:14894730-14900005_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.8734 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD30B-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD30B-2:4
4.0 lnc-ANKRD30B-2:4
4.1 lnc-ANKRD30B-2:4
5.0 lnc-ANKRD30B-2:4
5.1 lnc-RIOK3-91:1
5.2 lnc-ANKRD30B-2:4