Transcript: lnc-ANKRD36-1:11

Basic information

LNCipedia transcript ID: lnc-ANKRD36-1:11 
LNCipedia gene ID: lnc-ANKRD36-1
Ensembl Gene ID: ENSG00000277701
Ensembl Transcript ID: ENST00000618066
Location (hg38): chr2:97284433-97291780
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 724 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000618066.1
Alternative gene names: ENSG00000277701.4; RP11-734K23.9; AC159540.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.4648 non-coding 
CPAT coding probability 4.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD36-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ANKRD36-1:11
4.1 lnc-ANKRD36-1:11
5.0 lnc-ANKRD36-1:11
5.1 lnc-SLC9A4-100:10
5.2 lnc-ANKRD36-1:11