Transcript: lnc-ANKRD36-1:5

Basic information

LNCipedia transcript ID: lnc-ANKRD36-1:5 
LNCipedia gene ID: lnc-ANKRD36-1
RefSeq ID: NR_103733
Location (hg38): chr2:97283935-97291878
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 804 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT072620; NR_103733; NR_103733.1
Alternative gene names: LOC100506076


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.9144 non-coding 
CPAT coding probability 1.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD36-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD36-1:5
4.0 lnc-ANKRD36-1:5
4.1 lnc-ANKRD36-1:5
5.0 lnc-ANKRD36-1:5
5.1 lnc-SLC9A4-100:8
5.2 lnc-ANKRD36-1:5