Transcript: lnc-ANKRD36B-3:4

Basic information

LNCipedia transcript ID: lnc-ANKRD36B-3:4 
LNCipedia gene ID: lnc-ANKRD36B-3
Ensembl Gene ID: ENSG00000230606
Ensembl Transcript ID: ENST00000620272
Location (hg38): chr2:97422955-97433487
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 699 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000620272.4
Alternative gene names: ENSG00000230606.10; AC159540.1; AC092683.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.2756 non-coding 
CPAT coding probability 5.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD36B-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ACTR1B-3:30
4.1 lnc-ACTR1B-3:30
5.0 lnc-ACTR1B-3:30
5.1 lnc-AFF3-48:4
5.2 lnc-ANKRD36B-3:4