Transcript: lnc-ANKRD42-2:8

Basic information

LNCipedia transcript ID: lnc-ANKRD42-2:8 
LNCipedia gene ID: lnc-ANKRD42-2
Location (hg38): chr11:83286479-83305124
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 333 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255234.1|ENST00000534572.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -70.7423 non-coding 
CPAT coding probability 5.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD42-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANKRD42-2:8
5.0 lnc-ANKRD42-2:8
5.1 lnc-DDIAS-11:8
5.2 lnc-ANKRD42-2:8