Transcript: lnc-ANKRD42-2:9

Basic information

LNCipedia transcript ID: lnc-ANKRD42-2:9 
LNCipedia gene ID: lnc-ANKRD42-2
Location (hg38): chr11:83286479-83308640
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 22162 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255234.1|ENCT00000069907.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.1583 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD42-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANKRD42-2:9
5.0 lnc-ANKRD42-2:9
5.1 lnc-DDIAS-11:9
5.2 lnc-ANKRD42-2:9