Transcript: lnc-ANKRD50-7:1

Basic information

LNCipedia transcript ID: lnc-ANKRD50-7:1 
LNCipedia gene ID: lnc-ANKRD50-7
Location (hg38): chr4:124719392-124777884
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1771 bp
Exons: 9
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003ife_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.3189 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD50-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD50-7:1
4.0 lnc-ANKRD50-7:1
4.1 lnc-ANKRD50-7:1
5.0 lnc-ANKRD50-7:1
5.1 lnc-TRPC3-18:1
5.2 lnc-ANKRD50-7:1