Transcript: lnc-ANKRD55-7:2

Basic information

LNCipedia transcript ID: lnc-ANKRD55-7:2 
LNCipedia gene ID: lnc-ANKRD55-7
Location (hg38): chr5:56533150-56535423
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 300 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010344; NONHSAT101546
Alternative gene names: XLOC_004831; linc-ANKRD55-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD55-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTC-236F12.4.1-3:2
3.1 lnc-CTC-236F12.4.1-3:2
4.0 lnc-CTC-236F12.4.1-3:2
4.1 lnc-CTC-236F12.4.1-3:2
5.0 lnc-CTC-236F12.4.1-3:2
5.1 lnc-ACTBL2-12:2
5.2 lnc-ANKRD55-7:2