Transcript: lnc-ANKS4B-5:9

Basic information

LNCipedia transcript ID: lnc-ANKS4B-5:9 
LNCipedia gene ID: lnc-ANKS4B-5
Location (hg38): chr16:21300884-21376694
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1373 bp
Exons: 9
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000189149.7|FTMT26300043874.1
Alternative gene names: FLJ41766


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 158.7037 coding 
CPAT coding probability 12.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANKS4B-5:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CRYM-AS1:8
5.0 CRYM-AS1:8
5.1 lnc-TMC5-34:9
5.2 lnc-ANKS4B-5:9