Transcript: lnc-ANO5-2:1

Basic information

LNCipedia transcript ID: lnc-ANO5-2:1 
LNCipedia gene ID: lnc-ANO5-2
Location (hg38): chr11:21982973-22119892
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 435 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00019257
Alternative gene names: XLOC_009087; linc-ANO5-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -171.9243 non-coding 
CPAT coding probability 4.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANO5-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANO5-2:1
3.1 lnc-ANO5-2:1
4.0 lnc-ANO5-2:1
4.1 lnc-ANO5-2:1
5.0 lnc-ANO5-2:1
5.1 lnc-KCNC1-38:2
5.2 lnc-ANO5-2:1