Transcript: lnc-ANP32A-2:2

Basic information

LNCipedia transcript ID: lnc-ANP32A-2:2 
LNCipedia gene ID: lnc-ANP32A-2
Location (hg38): chr15:69286105-69298758
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 571 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000563004.1; RP11-352D13.6-002; OTTHUMT00000421963.1
Alternative gene names: ENSG00000261634.1; RP11-352D13.6; OTTHUMG00000173056.1; ENSG00000261634.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.6598 non-coding 
CPAT coding probability 10.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANP32A-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANP32A-2:2
4.0 lnc-ANP32A-2:2
4.1 lnc-ANP32A-2:2
5.0 lnc-ANP32A-2:2
5.1 lnc-CLN6-11:8
5.2 lnc-ANP32A-2:2