Transcript: lnc-ANP32A-2:4

Basic information

LNCipedia transcript ID: lnc-ANP32A-2:4 
LNCipedia gene ID: lnc-ANP32A-2
Ensembl Gene ID: ENSG00000261634
Ensembl Transcript ID: ENST00000570122
Location (hg38): chr15:69278328-69288439
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 766 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000570122.1; RP11-352D13.6-004; OTTHUMT00000421961.1; NONHSAT046927
Alternative gene names: ENSG00000261634.1; RP11-352D13.6; OTTHUMG00000173056.1; ENSG00000261634.2; ENSG00000261634.3; AC026992.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.792 non-coding 
CPAT coding probability 28.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANP32A-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANP32A-2:4
4.0 lnc-ANP32A-2:4
4.1 lnc-ANP32A-2:4
5.0 lnc-ANP32A-2:4
5.1 lnc-CLN6-11:13
5.2 lnc-ANP32A-2:4