Transcript: lnc-ANP32D-1:2

Basic information

LNCipedia transcript ID: lnc-ANP32D-1:2 
LNCipedia gene ID: lnc-ANP32D-1
Location (hg38): chr12:48455714-48459402
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 279 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020410; NONHSAT028003
Alternative gene names: XLOC_009736; linc-ANP32D-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.6225 non-coding 
CPAT coding probability 2.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANP32D-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANP32D-1:2
3.1 lnc-ANP32D-1:2
4.0 lnc-ANP32D-1:2
4.1 lnc-ANP32D-1:2
5.0 lnc-ANP32D-1:2
5.1 lnc-TEX49-11:3
5.2 lnc-ANP32D-1:2