Transcript: lnc-ANP32D-1:3

Basic information

LNCipedia transcript ID: lnc-ANP32D-1:3 
LNCipedia gene ID: lnc-ANP32D-1
Location (hg38): chr12:48455298-48459757
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 999 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT028001; FPKM1_group_6193_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.8318 non-coding 
CPAT coding probability 1.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANP32D-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANP32D-1:3
4.0 lnc-ANP32D-1:3
4.1 lnc-ANP32D-1:3
5.0 lnc-ANP32D-1:3
5.1 lnc-TEX49-11:1
5.2 lnc-ANP32D-1:3