Transcript: lnc-ANTXRL-2:1

Basic information

LNCipedia transcript ID: lnc-ANTXRL-2:1 
LNCipedia gene ID: lnc-ANTXRL-2
Location (hg38): chr10:46284848-46285997
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1150 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000563046.1; RP11-292F22.7-001; OTTHUMT00000431592.1; NONHSAT013195
Alternative gene names: ENSG00000259942.1; RP11-292F22.7; OTTHUMG00000176169.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 100.0161 coding 
CPAT coding probability 15.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANTXRL-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANTXRL-2:1
4.0 lnc-ANTXRL-2:1
4.1 lnc-ANTXRL-2:1
5.0 lnc-ANTXRL-2:1
5.1 lnc-NPY4R2-43:1
5.2 lnc-ANTXRL-2:1