Transcript: lnc-ANXA2R-1:21

Basic information

LNCipedia transcript ID: lnc-ANXA2R-1:21 
LNCipedia gene ID: lnc-ANXA2R-1
Location (hg38): chr5:43016054-43018756
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2703 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1119:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.2322 non-coding 
CPAT coding probability 5.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANXA2R-1:21 no no no no

Available literature

  1. Gu (2015), Aberrant expression of long noncoding RNAs in chronic thromboembolic pulmonary hypertension., Mol Med Rep
  2. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C5orf39-1:17
4.1 lnc-C5orf39-1:17
5.0 lnc-C5orf39-1:17
5.1 lnc-SELENOP-8:21
5.2 lnc-ANXA2R-1:21