Transcript: lnc-ANXA2R-1:28

Basic information

LNCipedia transcript ID: lnc-ANXA2R-1:28 
LNCipedia gene ID: lnc-ANXA2R-1
RefSeq ID: NR_104643
Location (hg38): chr5:42985398-42993333
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2760 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104643.1
Alternative gene names: FLJ32255

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.0389 non-coding 
CPAT coding probability 5.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANXA2R-1:28 no no no no

Available literature

  1. Gu (2015), Aberrant expression of long noncoding RNAs in chronic thromboembolic pulmonary hypertension., Mol Med Rep
  2. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SELENOP-8:28
5.1 lnc-SELENOP-8:28
5.2 lnc-ANXA2R-1:28