Transcript: lnc-ANXA2R-3:1

Basic information

LNCipedia transcript ID: lnc-ANXA2R-3:1 
LNCipedia gene ID: lnc-ANXA2R-3
Location (hg38): chr5:43050178-43054568
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2584 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003jnc_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.3693 non-coding 
CPAT coding probability 27.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANXA2R-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C5orf39-3:1
4.0 lnc-C5orf39-3:1
4.1 lnc-C5orf39-3:1
5.0 lnc-C5orf39-3:1
5.1 lnc-SELENOP-5:1
5.2 lnc-ANXA2R-3:1