Transcript: lnc-ANXA2R-4:1

Basic information

LNCipedia transcript ID: lnc-ANXA2R-4:1 
LNCipedia gene ID: lnc-ANXA2R-4
Location (hg38): chr5:43021139-43027074
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 760 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2912_chr5:43021240-43027175_prostate
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.9826 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANXA2R-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C5orf39-4:1
4.0 lnc-C5orf39-4:1
4.1 lnc-C5orf39-4:1
5.0 lnc-C5orf39-4:1
5.1 lnc-SELENOP-2:1
5.2 lnc-ANXA2R-4:1