Transcript: lnc-ANXA4-1:1

Basic information

LNCipedia transcript ID: lnc-ANXA4-1:1 
LNCipedia gene ID: lnc-ANXA4-1
Location (hg38): chr2:69644425-69781560
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 905 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000418066.2; AC092431.1-001; OTTHUMT00000327342.2; NONHSAT071354
Alternative gene names: ENSG00000234198.2; AC092431.1; OTTHUMG00000152686.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.1838 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANXA4-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANXA4-1:1
4.0 lnc-ANXA4-1:1
4.1 lnc-ANXA4-1:1
5.0 lnc-ANXA4-1:1
5.1 lnc-AFTPH-88:3
5.2 lnc-ANXA4-1:1