Transcript: lnc-AOC1-2:1

Basic information

LNCipedia transcript ID: lnc-AOC1-2:1 
LNCipedia gene ID: lnc-AOC1-2
Location (hg38): chr7:150871301-150871971
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 671 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_engstrom06_BM715580_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.8766 non-coding 
CPAT coding probability 2.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AOC1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABP1-2:1
4.0 lnc-ABP1-2:1
4.1 lnc-ABP1-2:1
5.0 lnc-ABP1-2:1
5.1 lnc-GIMAP2-11:1
5.2 lnc-AOC1-2:1