Transcript: lnc-AP3B2-1:6

Basic information

LNCipedia transcript ID: lnc-AP3B2-1:6 
LNCipedia gene ID: lnc-AP3B2-1
Location (hg38): chr15:82710471-82711760
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 436 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000559535.5
Alternative gene names: ENSG00000228141.6; AC105339.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -191.1564 non-coding 
CPAT coding probability 27.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AP3B2-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AP3B2-1:6
4.1 lnc-AP3B2-1:6
5.0 lnc-AP3B2-1:6
5.1 lnc-FSD2-5:5
5.2 lnc-AP3B2-1:6