Transcript: lnc-AP3S1-4:8

Basic information

LNCipedia transcript ID: lnc-AP3S1-4:8 
LNCipedia gene ID: lnc-AP3S1-4
Location (hg38): chr5:115602117-115603205
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 504 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249249.1|ENST00000506485.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -82.0859 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AP3S1-4:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AP3S1-4:8
5.0 lnc-AP3S1-4:8
5.1 lnc-AP3S1-4:8
5.2 lnc-AP3S1-4:8