Transcript: lnc-APBB1IP-4:2

Basic information

LNCipedia transcript ID: lnc-APBB1IP-4:2 
LNCipedia gene ID: lnc-APBB1IP-4
Location (hg38): chr10:26368633-26370273
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 656 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_3035_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.3638 non-coding 
CPAT coding probability 4.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APBB1IP-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-APBB1IP-4:2
4.0 lnc-APBB1IP-4:2
4.1 lnc-APBB1IP-4:2
5.0 lnc-APBB1IP-4:2
5.1 lnc-NPY4R2-260:2
5.2 lnc-APBB1IP-4:2