Transcript: lnc-APEX1-6:1

Basic information

LNCipedia transcript ID: lnc-APEX1-6:1 
LNCipedia gene ID: lnc-APEX1-6
Location (hg38): chr14:20461993-20462301
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 309 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000018191.1|FTMT25600000093.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APEX1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-APEX1-6:1
5.0 lnc-APEX1-6:1
5.1 lnc-OR4K15-17:1
5.2 lnc-APEX1-6:1