Transcript: lnc-APH1B-2:1

Basic information

LNCipedia transcript ID: lnc-APH1B-2:1 
LNCipedia gene ID: lnc-APH1B-2
Location (hg38): chr15:63398670-63406229
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1294 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1172_chr15:63690868-63698364_adipose
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.5556 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APH1B-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-APH1B-2:1
4.0 lnc-APH1B-2:1
4.1 lnc-APH1B-2:1
5.0 lnc-APH1B-2:1
5.1 lnc-MAP2K1-48:1
5.2 lnc-APH1B-2:1