Transcript: lnc-APOB-13:2

Basic information

LNCipedia transcript ID: lnc-APOB-13:2 
LNCipedia gene ID: lnc-APOB-13
Location (hg38): chr2:21461156-21503043
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4759 bp
Exons: 8
Sources: Nielsen et al.,2014
Alternative transcript names: l_1791_chr2:21684027-21724125_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.7581 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APOB-13:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-APOB-13:2
4.0 lnc-APOB-13:2
4.1 lnc-APOB-13:2
5.0 lnc-APOB-13:2
5.1 lnc-DNAJC27-61:2
5.2 lnc-APOB-13:2