Transcript: lnc-APOBEC3G-1:1

Basic information

LNCipedia transcript ID: lnc-APOBEC3G-1:1 
LNCipedia gene ID: lnc-APOBEC3G-1
Location (hg38): chr22:39091634-39092855
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 592 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000424436; NONHSAT086750
Alternative gene names: ENSG00000225720; RP4-742C19.12


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.0591 non-coding 
CPAT coding probability 3.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APOBEC3G-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-APOBEC3G-1:1
3.1 lnc-APOBEC3G-1:1
4.0 lnc-APOBEC3G-1:1
4.1 lnc-APOBEC3G-1:1
5.0 lnc-APOBEC3G-1:1
5.1 lnc-APOBEC3H-1:2
5.2 lnc-APOBEC3G-1:1