Transcript: lnc-APOD-6:4

Basic information

LNCipedia transcript ID: lnc-APOD-6:4 
LNCipedia gene ID: lnc-APOD-6
RefSeq ID: NR_136185
Location (hg38): chr3:195646696-195652159
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 630 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136185.1
Alternative gene names: LOC105374297


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.4132 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APOD-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MUC4-6:1
5.1 lnc-MUC4-6:1
5.2 lnc-APOD-6:4