Transcript: lnc-APOLD1-1:2

Basic information

LNCipedia transcript ID: lnc-APOLD1-1:2 
LNCipedia gene ID: lnc-APOLD1-1
Ensembl Gene ID: ENSG00000275560
Ensembl Transcript ID: ENST00000614874
Location (hg38): chr12:12718973-12719521
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 549 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000614874.1
Alternative gene names: ENSG00000275560.1; RP11-180M15.7; AC008115.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -105.1058 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APOLD1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-59H1.3.1-1:1
4.1 lnc-RP11-59H1.3.1-1:1
5.0 lnc-RP11-59H1.3.1-1:1
5.1 lnc-BCL2L14-15:1
5.2 lnc-APOLD1-1:2