Transcript: lnc-AQP11-1:2

Basic information

LNCipedia transcript ID: lnc-AQP11-1:2 
LNCipedia gene ID: lnc-AQP11-1
Location (hg38): chr11:77571143-77579732
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6065 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019399; NONHSAT023222
Alternative gene names: XLOC_009222; linc-AQP11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 85.8226 coding 
CPAT coding probability 50.36% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AQP11-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AQP11-1:2
3.1 lnc-AQP11-1:2
4.0 lnc-AQP11-1:2
4.1 lnc-AQP11-1:2
5.0 lnc-AQP11-1:2
5.1 lnc-DDIAS-57:3
5.2 lnc-AQP11-1:2