Transcript: lnc-AQP12A-1:11

Basic information

LNCipedia transcript ID: lnc-AQP12A-1:11 
LNCipedia gene ID: lnc-AQP12A-1
Location (hg38): chr2:240689465-240690413
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 949 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000600041.1
Alternative gene names: ENSG00000219159.3; AC011298.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.2086 non-coding 
CPAT coding probability 6.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AQP12A-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC011298.2.1-1:8
4.0 lnc-AC011298.2.1-1:8
4.1 lnc-AC011298.2.1-1:8
5.0 lnc-AC011298.2.1-1:8
5.1 lnc-SNED1-13:8
5.2 lnc-AQP12A-1:11