Transcript: lnc-AREG-1:3

Basic information

LNCipedia transcript ID: lnc-AREG-1:3 
LNCipedia gene ID: lnc-AREG-1
Location (hg38): chr4:74544288-74546045
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1758 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000068962.1|ENCT00000320231.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -165.4987 non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AREG-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AREGB-1:5
5.0 lnc-AREGB-1:5
5.1 lnc-ART3-21:2
5.2 lnc-AREG-1:3