Transcript: lnc-ARF5-3:3

Basic information

LNCipedia transcript ID: lnc-ARF5-3:3 
LNCipedia gene ID: lnc-ARF5-3
RefSeq ID: NR_110195
Location (hg38): chr7:127215127-127229921
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1676 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110195; NR_110195.1
Alternative gene names: LOC101928333


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.6431 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARF5-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARF5-3:3
4.0 lnc-ARF5-3:3
4.1 lnc-ARF5-3:3
5.0 lnc-ARF5-3:3
5.1 lnc-TSPAN33-52:3
5.2 lnc-ARF5-3:3