Transcript: lnc-ARF5-5:4

Basic information

LNCipedia transcript ID: lnc-ARF5-5:4 
LNCipedia gene ID: lnc-ARF5-5
Location (hg38): chr7:126233659-126251196
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 353 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT123116
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.9155 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARF5-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARF5-5:4
4.0 lnc-ARF5-5:4
4.1 lnc-ARF5-5:4
5.0 lnc-ARF5-5:4
5.1 lnc-SPAM1-19:4
5.2 lnc-ARF5-5:4