Transcript: lnc-ARF6-5:6

Basic information

LNCipedia transcript ID: lnc-ARF6-5:6 
LNCipedia gene ID: lnc-ARF6-5
Location (hg38): chr14:49862998-49867130
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4133 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000018861.1|ENCT00000125607.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.3829 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARF6-5:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARF6-5:6
5.0 lnc-ARF6-5:6
5.1 lnc-AP5M1-115:4
5.2 lnc-ARF6-5:6