Transcript: lnc-ARFGEF2-6:1

Basic information

LNCipedia transcript ID: lnc-ARFGEF2-6:1 
LNCipedia gene ID: lnc-ARFGEF2-6
Location (hg38): chr20:48702769-48704600
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1832 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT080182
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.4525 non-coding 
CPAT coding probability 39.55% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARFGEF2-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARFGEF2-6:1
4.0 lnc-ARFGEF2-6:1
4.1 lnc-ARFGEF2-6:1
5.0 lnc-ARFGEF2-6:1
5.1 lnc-SNAI1-41:1
5.2 lnc-ARFGEF2-6:1