Transcript: lnc-ARFRP1-1:1

Basic information

LNCipedia transcript ID: lnc-ARFRP1-1:1 
LNCipedia gene ID: lnc-ARFRP1-1
Location (hg38): chr20:63695340-63696412
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 904 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT080915
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.048 non-coding 
CPAT coding probability 52.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARFRP1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARFRP1-1:1
4.0 lnc-ARFRP1-1:1
4.1 lnc-ARFRP1-1:1
5.0 lnc-ARFRP1-1:1
5.1 lnc-SPATA2-201:1
5.2 lnc-ARFRP1-1:1