Transcript: lnc-ARHGAP10-5:9

Basic information

LNCipedia transcript ID: lnc-ARHGAP10-5:9 
LNCipedia gene ID: lnc-ARHGAP10-5
Location (hg38): chr4:148445616-148485426
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 591 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000070525.1|ENCT00000324913.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -141.4633 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP10-5:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARHGAP10-5:9
5.0 lnc-ARHGAP10-5:9
5.1 lnc-C4orf51-28:9
5.2 lnc-ARHGAP10-5:9