Transcript: lnc-ARHGAP11A-1:2

Basic information

LNCipedia transcript ID: lnc-ARHGAP11A-1:2 
LNCipedia gene ID: lnc-ARHGAP11A-1
Location (hg38): chr15:32613863-32615111
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 602 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000244952.2|ENST00000500941.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -164.0688 non-coding 
CPAT coding probability 7.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP11A-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARHGAP11A-1:2
5.0 lnc-ARHGAP11A-1:2
5.1 lnc-SNRPN-146:2
5.2 lnc-ARHGAP11A-1:2