Transcript: lnc-ARHGAP12-1:2

Basic information

LNCipedia transcript ID: lnc-ARHGAP12-1:2 
LNCipedia gene ID: lnc-ARHGAP12-1
Location (hg38): chr10:31693084-31707447
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 406 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237797.1|ENST00000433770.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -177.3069 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP12-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARHGAP12-1:2
5.0 lnc-ARHGAP12-1:2
5.1 lnc-CUL2-47:1
5.2 lnc-ARHGAP12-1:2