Transcript: lnc-ARHGAP17-7:1

Basic information

LNCipedia transcript ID: lnc-ARHGAP17-7:1 
LNCipedia gene ID: lnc-ARHGAP17-7
Location (hg38): chr16:25010933-25019064
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 378 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1293_chr16:25022253-25030325_76bGuttman_hLF
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -247.1504 non-coding 
CPAT coding probability 1.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP17-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP17-7:1
4.0 lnc-ARHGAP17-7:1
4.1 lnc-ARHGAP17-7:1
5.0 lnc-ARHGAP17-7:1
5.1 lnc-SULT1A2-133:1
5.2 lnc-ARHGAP17-7:1