Transcript: lnc-ARHGAP23-1:2

Basic information

LNCipedia transcript ID: lnc-ARHGAP23-1:2 
LNCipedia gene ID: lnc-ARHGAP23-1
Location (hg38): chr17:38601071-38602701
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 549 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000265130.1|ENST00000583075.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -103.6732 non-coding 
CPAT coding probability 1.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP23-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARHGAP23-1:2
5.0 lnc-ARHGAP23-1:2
5.1 lnc-RPL19-21:2
5.2 lnc-ARHGAP23-1:2