Transcript: lnc-ARHGAP27-2:1

Basic information

LNCipedia transcript ID: lnc-ARHGAP27-2:1 
LNCipedia gene ID: lnc-ARHGAP27-2
Location (hg38): chr17:45449198-45450181
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 800 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT054120
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.0255 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP27-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP27-2:1
4.0 lnc-ARHGAP27-2:1
4.1 lnc-ARHGAP27-2:1
5.0 lnc-ARHGAP27-2:1
5.1 lnc-GFAP-30:1
5.2 lnc-ARHGAP27-2:1