Transcript: lnc-ARHGAP28-10:12

Basic information

LNCipedia transcript ID: lnc-ARHGAP28-10:12 
LNCipedia gene ID: lnc-ARHGAP28-10
Location (hg38): chr18:5895639-5946917
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 19096 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000035044.1|MICT00000158119.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.4998 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP28-10:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AP001496.1-10:11
5.0 lnc-AP001496.1-10:11
5.1 lnc-RIOK3-250:11
5.2 lnc-ARHGAP28-10:12