Transcript: lnc-ARHGAP28-10:2

Basic information

LNCipedia transcript ID: lnc-ARHGAP28-10:2 
LNCipedia gene ID: lnc-ARHGAP28-10
Location (hg38): chr18:5880673-5888032
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 495 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026270; NONHSAT057099
Alternative gene names: XLOC_012618; linc-ARHGAP28-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -239.2351 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP28-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AP001496.1-4:1
3.1 lnc-AP001496.1-10:1
4.0 lnc-AP001496.1-10:1
4.1 lnc-AP001496.1-10:1
5.0 lnc-AP001496.1-10:1
5.1 lnc-RIOK3-250:1
5.2 lnc-ARHGAP28-10:2