Transcript: lnc-ARHGAP6-6:1

Basic information

LNCipedia transcript ID: lnc-ARHGAP6-6:1 
LNCipedia gene ID: lnc-ARHGAP6-6
Ensembl Gene ID: ENSG00000282840
Ensembl Transcript ID: ENST00000634846
Location (hg38): chrX:11668401-11757718
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1893 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634846.1
Alternative gene names: ENSG00000282840.1; GS1-590J6.3; AC004554.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -62.8155 non-coding 
CPAT coding probability 6.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP6-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ARHGAP6-6:1
4.1 lnc-ARHGAP6-6:1
5.0 lnc-ARHGAP6-6:1
5.1 lnc-PCSK1N-213:1
5.2 lnc-ARHGAP6-6:1