Transcript: lnc-ARHGEF26-12:1

Basic information

LNCipedia transcript ID: lnc-ARHGEF26-12:1 
LNCipedia gene ID: lnc-ARHGEF26-12
Location (hg38): chr3:153797365-153797890
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 526 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr3_10406_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.5247 non-coding 
CPAT coding probability 5.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGEF26-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf79-8:1
4.0 lnc-C3orf79-8:1
4.1 lnc-C3orf79-8:1
5.0 lnc-C3orf79-8:1
5.1 lnc-LEKR1-35:1
5.2 lnc-ARHGEF26-12:1