Transcript: lnc-ARIH2-4:1

Basic information

LNCipedia transcript ID: lnc-ARIH2-4:1 
LNCipedia gene ID: lnc-ARIH2-4
Location (hg38): chr3:48822877-48831545
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4047 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_2363_chr3:48860309-48864621_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.7165 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARIH2-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARIH2-4:1
4.0 lnc-ARIH2-4:1
4.1 lnc-ARIH2-4:1
5.0 lnc-ARIH2-4:1
5.1 lnc-CCDC36-19:1
5.2 lnc-ARIH2-4:1